Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVQCGQVTQLMAPCMPYLSGAPGMTPYGICCNSLGVLNQLAASTADRVAACNCVKAAASGGFPAVDFSRAAALPAACGLAINFAVTPNMDCNQVTDEP
1T12 Chain:A ((1-91))
AITCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAG-AISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83147 for 683 contacts (-121.7/contact) +
2D Compatibility (PS) -9293 + (NN) -2939 + (LL) -196
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -105375.0 ( -154.28 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: