Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CEVTQLAVCASAILGGTKPSGECCGNLRAQQGCFCQYVKDPNYGHYVNSPHARETLQTCGIALPHC
1N89 Chain:A ((2-67))
CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37415 for 428 contacts (-87.4/contact) +
2D Compatibility (PS) -6754 + (NN) -111 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -54430.0 ( -127.17 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: