Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRVLSEDKKVACIVTDLQVCLSALETPIPPSAECCKNLKIQKSCLCDYMENPSIEKYLEP--ARKVFAACGMPYPRC
1N89 Chain:A ((1-67))
----------ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34352 for 408 contacts (-84.2/contact) +
2D Compatibility (PS) -6799 + (NN) -5572 + (LL) 964
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -52259.0 ( -128.09 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: