Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKN-------PVLLPRLLIACRVPHPKC
1N89 Chain:A ((6-67))
---------QLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41965 for 330 contacts (-127.2/contact) +
2D Compatibility (PS) -5673 + (NN) -3433 + (LL) 680
1D Compatibility (HY) -400 + (ID) 850
Total energy: -51641.0 ( -156.49 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: