Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGGGGGECVPQLNRLLACRAYAV-----PGAGDP----SAECCSALSSISQGCACSAIS--------------------------------IMNSL--PSRCHLSQINCSA
1BEA Chain:A ((15-109))
------------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40446 for 308 contacts (-131.3/contact) +
2D Compatibility (PS) -5697 + (NN) -4860 + (LL) -140
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -56893.0 ( -184.72 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: