Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIG---RNP---KCLCAVMLSNTARSAGVKPAVAMTIPKRCAIA-NRPIG--YKCGPYTLP
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52796 for 568 contacts (-93.0/contact) +
2D Compatibility (PS) -8590 + (NN) -6018 + (LL) -4
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -72858.0 ( -128.27 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: