Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGKQS-----PKCLCAVMLSSTTRNAGIKPEVAITIPKRCNIADR-PVG--YKCGDYTLP
1FK5 Chain:A ((1-93))
-------AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27358 for 601 contacts (-45.5/contact) +
2D Compatibility (PS) -8710 + (NN) -5393 + (LL) -252
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -46763.0 ( -77.81 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: