Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIG-THQSH---ACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLPSLQG----
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS---IPYTIS----TSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35928 for 588 contacts (-61.1/contact) +
2D Compatibility (PS) -9149 + (NN) -9640 + (LL) 264
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -59203.0 ( -100.69 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: