Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI--------DVPCACRYVSRDVTNYID--MDKVVYVARSCGKKIPSGYK------CGSYTIPAA
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGP-G---PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCG--VNLPYTISLNIDCSRV-----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48659 for 465 contacts (-104.6/contact) +
2D Compatibility (PS) -7564 + (NN) -358 + (LL) 464
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -61317.0 ( -131.86 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: