Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDNNPLEHCRDVFVSFMPCMGFVEGIFQQPSPDCCRGVTHLNNVVKFTSPGSRNRQDSGETERVCLCIEIMGNANHLPFLPAAINNLPLRCSLTLSFPISVDMDCSQFRNTKNPDVEKLN
1BWO Chain:A ((1-90))
------IDCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQS----------DRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLPYTISLNIDCSRV------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60572 for 622 contacts (-97.4/contact) +
2D Compatibility (PS) -8761 + (NN) 1102 + (LL) 148
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -74583.0 ( -119.91 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: