Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVNPCVAYGLGR-APIAPCCRALNDLRFVD-SRNLRRAACRCLVGVVNRNPGLRRNNRFQNVPGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNED-NARSIPPKCGVNL--PYTISLNIDCSRV-------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47969 for 610 contacts (-78.6/contact) +
2D Compatibility (PS) -9411 + (NN) -5760 + (LL) 1448
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -68642.0 ( -112.53 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: