Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCPTVTTQLAPCLSYIQGGGD-PSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTHAGNV-NPTLVAQLPKKCGISFNMP-PIDKNYDCNTISMY
1BWO Chain:A ((1-90))
--IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58767 for 580 contacts (-101.3/contact) +
2D Compatibility (PS) -8780 + (NN) -644 + (LL) 296
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -75645.0 ( -130.42 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: