Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCGVVASNLAPCIGYLRNGGKVPDPCCKGVGALNNAAKTTKDRRDACNCIKTTATQIGGVNAANAAALPGFCRVNIPYKISTSTNCASIK
1T12 Chain:A ((2-91))
ITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57345 for 679 contacts (-84.5/contact) +
2D Compatibility (PS) -9162 + (NN) -1338 + (LL) 64
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -79131.0 ( -116.54 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: