Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVSSSLAPCIAYLQKGGTPAPGCCNGVKSLVGAAQTTADKQAVCNCLKGAAGQVPGLNNQYAQSLPSLCGVNIPYKISTSTNCASIKF
2ALG Chain:A ((2-92))
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK-
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60757 for 629 contacts (-96.6/contact) +
2D Compatibility (PS) -8969 + (NN) -586 + (LL) 132
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -81280.0 ( -129.22 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: