Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCQVTQLAPCASAISSSSPPSSQCCAKIKEQKPCLCQYMKNPSLKAYVSSPNAKKVANACGVPIPKC
1N89 Chain:A ((1-67))
-ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22621 for 433 contacts (-52.2/contact) +
2D Compatibility (PS) -7009 + (NN) -5095 + (LL) 192
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -42033.0 ( -97.07 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: