Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYGR-S-PSADCCQRVRVSHV----------ECVCPYVTPKTASIIGVIGVDNVVKKIEGCGRTVP----RKFKCGSITTP
1AFH Chain:A ((3-92))
-----SCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGV-SGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33098 for 532 contacts (-62.2/contact) +
2D Compatibility (PS) -7573 + (NN) -685 + (LL) 92
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -43814.0 ( -82.36 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: