Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYGR-S-PSADCCQRVRVSHV----------ECVCPYVTPKTASIIGAIGVDNVVKKIEGCGRTVP----RKFKCGSITTP
1AFH Chain:A ((3-92))
-----SCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGV-SGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32816 for 532 contacts (-61.7/contact) +
2D Compatibility (PS) -7585 + (NN) -1036 + (LL) 92
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -44295.0 ( -83.26 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: