Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVDCTTLVLSMADCLSFVSNDSTSKKPEGTCCSGLKTVLGTDA-------ECLCEAFKSSA-QFGVVLNVTKALALPSACKIKAP----PASNCG
1T12 Chain:A ((1-88))
AITCGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVNIPYKISPSTDCS
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36404 for 522 contacts (-69.7/contact) +
2D Compatibility (PS) -7806 + (NN) -4167 + (LL) 592
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -56285.0 ( -107.83 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: