Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLENLSDMQVCAPLVLP---GAVN-PAPNSNCCIALQATNKDCICNALR-----------------------AATTFTTTCNLPSLDC
1HSS Chain:A ((14-104))
------VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35398 for 329 contacts (-107.6/contact) +
2D Compatibility (PS) -5642 + (NN) -1155 + (LL) 476
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -46569.0 ( -141.55 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: