Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLP---GAVN-PAPNSNCCIALQATNKDCICNALR-----------------------AATTFTTTCNLPSLDCGIT
1HSS Chain:A ((14-104))
------VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35962 for 329 contacts (-109.3/contact) +
2D Compatibility (PS) -5643 + (NN) -938 + (LL) 380
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -47013.0 ( -142.90 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: