Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QICTSQLNSLNVCAPFVV----PGAPNTNP----STDCCNALGAVQHDCLCSTLQ--------------------------------IAARL--PSQCNLPPITCGN
1BEA Chain:A ((14-109))
------HNPLPSCRWYVTSRTCGIGPR-LPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41701 for 313 contacts (-133.2/contact) +
2D Compatibility (PS) -5616 + (NN) -4931 + (LL) 432
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -57566.0 ( -183.92 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: