Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCQNQLNSLNVCAPFVV-----PGAANTSP----NAECCNALESVQNDCICNTLR--------------------------------IAGRL--PSLCNLSPINCGN
1BEA Chain:A ((14-109))
------HNPLPSCRWYVTSRTCGIGPR--LPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42489 for 310 contacts (-137.1/contact) +
2D Compatibility (PS) -5511 + (NN) -3437 + (LL) 84
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -56653.0 ( -182.75 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: