Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATAESLSPCASAV-----GNNPQDP----TPECCAVLQTANVDCICALVQ--------------------------------STMQL--PSECGLETPQCPSD
1BEA Chain:A ((15-109))
---------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28885 for 302 contacts (-95.6/contact) +
2D Compatibility (PS) -5537 + (NN) -5577 + (LL) 632
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -42967.0 ( -142.27 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: