Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLSNVQVCAAMVLPGSGRPNSECCAALQSTNRDCLCNALR-----------------------AATSLPSLCNLPP-VDCGINT
2DS2 Chain:B ((8-70))
-------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPFR-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24964 for 207 contacts (-120.6/contact) +
2D Compatibility (PS) -4498 + (NN) -5428 + (LL) 864
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -39626.0 ( -191.43 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: