Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCSKVGALIKTAP-----KCLCAVLLSPLAMQAGIKPGIAITIPKRCNIK-NRPVG--KKCGRYTVP
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55395 for 592 contacts (-93.6/contact) +
2D Compatibility (PS) -8815 + (NN) -3798 + (LL) 12
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -71796.0 ( -121.28 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: