Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSSSSCTNVLVSMSPCLDYIQGNSSKPSSSCCSQLANVVRS-------QPQCLCEVLNGGASSLGVSVNQTQAMALPTACNVKTP----PASQCNATIL
1SIY Chain:A ((2-89))
----TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVNIPYKISTSTNCNS---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42035 for 543 contacts (-77.4/contact) +
2D Compatibility (PS) -7950 + (NN) -2583 + (LL) 928
1D Compatibility (HY) -6800 + (ID) 1150
Total energy: -59590.0 ( -109.74 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: