Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMPASGLMACKPAVTPPNPPPPTSTCCSALSQADMRCLCSYKNSQLLPSLGIDPNLAMKLPSMCKLPHPANC
2RKN Chain:A ((2-77))
IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49408 for 526 contacts (-93.9/contact) +
2D Compatibility (PS) -8174 + (NN) -11474 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -78856.0 ( -149.92 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: