Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DSDQDKEECTQQLVALATCLPYVG-----GDAKAP----TPDCCSGLKQVLNNNKKCLCVIIKDRNDP------------DLG-L-----NINVTLALAL--PSVCNAPANVSKCPG
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45831 for 405 contacts (-113.2/contact) +
2D Compatibility (PS) -6245 + (NN) 838 + (LL) 840
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -55248.0 ( -136.41 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: