Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPSQCKEEQRLLVNACRPVIFGRSPSAACCQRVRVTHV----------ECVCPVVTPKLAAL--IGVERTIKQIEGCGRTVP----HNFKCGSITTP
1T12 Chain:A ((3-90))
-----TCGQVTSNL-APCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32990 for 483 contacts (-68.3/contact) +
2D Compatibility (PS) -7396 + (NN) -1939 + (LL) 144
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -46531.0 ( -96.34 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: