Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEALKLAPCAEAAQDQNAAVSASCCDQVRKIGQSPS------CLCAVMLSNTAKASGIKPEIAITIPKRCNIANRPVGYKCGPYT----LP
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS---IPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29353 for 579 contacts (-50.7/contact) +
2D Compatibility (PS) -8634 + (NN) -5500 + (LL) -160
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -48397.0 ( -83.59 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: