Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGNT---KVP---DSTCCTNLRKKINQTKKCLCLLVADRNDP-----DLG--F-----KVNATLALILPSICHAPSNASECPAEANKSSQ
1HSS Chain:A ((16-103))
--------------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH---GAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27787 for 399 contacts (-69.6/contact) +
2D Compatibility (PS) -5825 + (NN) 489 + (LL) 1588
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -35985.0 ( -90.19 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: