Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-DCKTSIPSLISQCSKYVQVSGPEIPPSQGCCDVMKDL--------DIPCLCNLVTPEVEKLVS--MEKVVFVARTCG----LTLEPGMKCGSFTVPPA
1BWO Chain:A ((1-90))
IDCGH-VDSLVRPCLSYVQ--GGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49269 for 480 contacts (-102.6/contact) +
2D Compatibility (PS) -7644 + (NN) -564 + (LL) 448
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -62979.0 ( -131.21 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: