Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QCS--LSQLSQCISAVTQ-GTNPPPLCCNEVAS--------ADFGCFCNLVSR--GNYPPAYVSNAVLVPQKCGGEAYSKLKGKT-CAGKSYHTGS
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDC--SRVN---
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28083 for 476 contacts (-59.0/contact) +
2D Compatibility (PS) -7769 + (NN) -3748 + (LL) -176
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -42926.0 ( -90.18 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: