Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKGLPGAKCLCSLLSH---PLARSQGVAPR--------IALGIPQKCRIAVPRGFVCQG----IRVPGS---
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVL--RDCCQQLAHI-----SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53797 for 489 contacts (-110.0/contact) +
2D Compatibility (PS) -8484 + (NN) -4229 + (LL) -412
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -70322.0 ( -143.81 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: