Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EVSCGDSVRALIPCGSFLVGADAAAAPSESCCRGALALRGMASTTAARRELCKCLMQSGPSF-GVLPDRARQLPARCNLGVAIPVGPETDCDKIP
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQ--GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59538 for 757 contacts (-78.6/contact) +
2D Compatibility (PS) -9743 + (NN) -3800 + (LL) 68
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -79313.0 ( -104.77 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: