Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGL-GIDATVCLCTAIHLKVLGLNVDIPLALKLLVT-CGRELPNGLTC
1HYP Chain:A ((6-77))
---------PSCP-----DLSICLNILGG---SLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATC
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83668 for 457 contacts (-183.1/contact) +
2D Compatibility (PS) -7255 + (NN) -2765 + (LL) 1128
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -103660.0 ( -226.83 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: