Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNCK-----STNPSPACCSFMRKITL----------ECVCPRITSDVTKY--ISLSSILTIAKICHRTLP----HQYQCGSYLLP
1T12 Chain:A ((3-90))
--TCGQVTSNL-APCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43906 for 416 contacts (-105.5/contact) +
2D Compatibility (PS) -6431 + (NN) 839 + (LL) 244
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -53554.0 ( -128.74 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: