Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTSYPGAQCCSSLTRFRG--------NPDCLCSTMLTARQQF-TFSVPNAFTIPERCGYANEIP----PHYKCGNYVVGH
1AFH Chain:A ((3-91))
-SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSI--PYTISTSTDCSR-----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42028 for 552 contacts (-76.1/contact) +
2D Compatibility (PS) -7832 + (NN) 329 + (LL) 824
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -53707.0 ( -97.30 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: