Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QREPAKCGSSDAG--SVLMPCFAFLEQQSR------EP-----------SARCCSAVANSTQKEPPRCLCVFLDQ--------L-ARAM---NRTQPLQLPSLCGDARLTAERCKGLFVANRFA
1W2Q Chain:A ((15-119))
-------SCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--APQRCDL--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30850 for 441 contacts (-70.0/contact) +
2D Compatibility (PS) -7803 + (NN) -2124 + (LL) 1888
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -43439.0 ( -98.50 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: