Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDATNNMGK--LLPCRQAAVK-----NGKDPKQLAGCCDAVKPFSGSKDAADCLCQSLLAAQK-------------VDKTVDLHSAIAIPAKCGIPV------QANLKCNGMA-VPQH
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHIS-----EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61515 for 581 contacts (-105.9/contact) +
2D Compatibility (PS) -8943 + (NN) -4508 + (LL) -140
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -81556.0 ( -140.37 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: