Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSATATPSAACCKVVEGFKSN--------PACLCSTIAAARAAGY-SINEHNAESIPTRCKLHGYTPCSKKN
1T12 Chain:A ((3-78))
-TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA-AGAISGINLGKAAGLPSTCGVNIP-------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43379 for 455 contacts (-95.3/contact) +
2D Compatibility (PS) -6963 + (NN) -1465 + (LL) 452
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -56455.0 ( -124.08 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: