Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPTECKEERKVAGNACRPVLYWRSPSADCCQRVRVSHV----------ECVCPYVSTKTAAIIGGLGVPYVVKKIEGCGRTVP----RKFKCGSITTP
1T12 Chain:A ((3-90))
-----TCGQVTSNL-APCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGA-ISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18194 for 496 contacts (-36.7/contact) +
2D Compatibility (PS) -7470 + (NN) -1458 + (LL) -36
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -30358.0 ( -61.21 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: