Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVLYG--QNPSADCCQRVR--------VSHVECVCPYVSTKTAAIIEVLGVPKAVKKIEGCGRTVP----RKFKCGSITTP
1FK5 Chain:A ((1-93))
AIS---CGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL-KNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19982 for 500 contacts (-40.0/contact) +
2D Compatibility (PS) -8080 + (NN) -950 + (LL) 28
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -31184.0 ( -62.37 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: