Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCEAAAQNE-------KAAPSKSCCLQVKKIGQNPDCLCAVMLSNTAKS------------SGIKPEVAVTIPKR-CNL--------ADRPVGYKCGAYTLP
1HSS Chain:A ((5-124))
--MC-YPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHI--SEWCRCGALYSMLDS-MYKEHGAFPRCRREVVKLTAASITA-VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27829 for 580 contacts (-48.0/contact) +
2D Compatibility (PS) -8826 + (NN) -6331 + (LL) -116
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -48002.0 ( -82.76 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: