Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDPKCKNVAESIIPCVEYIMTPDASNPPAPCCNGMTSLAGQVQALPERQFACRCIKDGIFDLPDLNLAALAALPNNCGVDLRFQITPDMDCDNLN
1AFH Chain:A ((1-93))
--AISCGQVASAIAPCISYARGQG-SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84172 for 764 contacts (-110.2/contact) +
2D Compatibility (PS) -9968 + (NN) -6509 + (LL) -72
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -107071.0 ( -140.15 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: