Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEPRVHLSMDDSGKKINLDIAPENCSATKDGFLCIDKNEQDYKLKILIKKS
3SL0 Chain:A ((346-402))
---------------------------------------NYREINLLMKILAETKRVVSMDLVEYNP----SLDEVDKKVHGDSLPILDNATKTGKLCLELIARVLGYDIV----
General information:
TITO was launched using:
RESULT:
Template:
3SL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17914 for 273 contacts (65.6/contact) +
2D Compatibility (PS) -5885 + (NN) -1802 + (LL) 2152
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 9379.0 ( 34.36 by residue)
QMean score : 0.039
(partial model without unconserved sides chains):
PDB file :
Tito_3SL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SL0-query.scw
PDB file :
Tito_Scwrl_3SL0.pdb
: