Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIRNSTYKISCESGKKDHLLHLANSFNKLVSSI---SHKTGGKGSDTLNFLLAALILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD
4IWB Chain:A ((14-106))
----------TKYQIRMQSGVA--MLAQANALPQLVLQLLRGAEAYFQNQVETATPLEQIILLYDKAIECLERAIEIYDQVNEL--EKRKEFVENIDRVYDIISALKS
General information:
TITO was launched using:
RESULT:
Template:
4IWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18728 for 515 contacts (-36.4/contact) +
2D Compatibility (PS) -9675 + (NN) -5227 + (LL) 1388
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -39642.0 ( -76.97 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_4IWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IWB-query.scw
PDB file :
Tito_Scwrl_4IWB.pdb
: