Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKSNIIMKVAKRHPLLDRIVIAAIVNRFFEILSSTLEHHNRVEIRGFGSFSIRSYNLKETSHLML-QKFAKNQYFKTYFRSSKKLSDLINE--
1IHF Chain:B ((1-94))
-MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
General information:
TITO was launched using:
RESULT:
Template:
1IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22333 for 456 contacts (-49.0/contact) +
2D Compatibility (PS) -9498 + (NN) -753 + (LL) 208
1D Compatibility (HY) -1600 + (ID) 1300
Total energy: -35276.0 ( -77.36 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IHF-query.scw
PDB file :
Tito_Scwrl_1IHF.pdb
: