Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFSKFLDPKNDVAFWCIFGTEKNKDIEFLITIMDVEIASKKQNIVDVLYKDENEVQVIVKIQAAKT-KGFKKRAQLHAAKAYSRQSNNYINLKKVFFIAISNSALFPEEVEYISAHSIRDIKTNGYH----LKDFQFVFIELPKFTKSKVEQLESTIERWYFFFKYAENTTDKDLRDIVEKFLMLKL--TYDELDKFSWNEKDLVVYEERVMDLQKEAAILEYKLDLAKGEGIKIGQ |
| 3L6H Chain:A ((105-229)) | --------------------------------------------------------------QANKTITGIEPGAGVMAAS--EKTLNSYDNLKDWKLVPSSSGAMTVALGEAIKQH--KDIVITGWSPHWMFNKYDLKYLADPKGTMG----------------------TSENINTIVRKGLKKENPEAYKVLDKFNWTTKDM---EAVMLDIQNGKTPEEAAKNWIKDHQKEVDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18372 for 644 contacts (28.5/contact) +
2D Compatibility (PS) -12111 + (NN) 2470 + (LL) 8648
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: 9379.0 ( 14.56 by residue)
QMean score : 0.233
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