Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEK-NNLPRIIDDNRAFAISQGSRKILEKLGIWQFIESE-AEPILDICILDENSPITVHYNHKMVSEEPMGYVINSTVIWNAINNNFLNKLNIYSLHSYRTITCDAGYVE--VTLGNNQKLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKHELHHQNLAVEQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLMNLSEEEFIIELKKRFGSYLGEVKLDGERKSYPLSFASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 4K22 Chain:A ((3-358)) | -SVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQR--PPQL----RVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224354 for 2962 contacts (-75.7/contact) +
2D Compatibility (PS) -37158 + (NN) -6950 + (LL) 2644
1D Compatibility (HY) -17600 + (ID) 5450
Total energy: -288868.0 ( -97.52 by residue)
QMean score : 0.491
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